Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scrt1Q99M85 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.21□□□□□ -0.61
Scrt1Q99M85 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scrt1Q99M85 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Scrt1Q99M85 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Gm14208-201ENSMUST00000119645 678 ntBASIC11.21□□□□□ -0.61
Scrt1Q99M85 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Gm24548-201ENSMUST00000158650 108 ntBASIC11.21□□□□□ -0.61
Scrt1Q99M85 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Scrt1Q99M85 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.21□□□□□ -0.61
Scrt1Q99M85 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Gm18212-201ENSMUST00000211678 889 ntBASIC11.21□□□□□ -0.61
Scrt1Q99M85 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scrt1Q99M85 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Scrt1Q99M85 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Scrt1Q99M85 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scrt1Q99M85 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scrt1Q99M85 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scrt1Q99M85 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scrt1Q99M85 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.21□□□□□ -0.62
Scrt1Q99M85 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.21□□□□□ -0.62
Scrt1Q99M85 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Scrt1Q99M85 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.21□□□□□ -0.62
Scrt1Q99M85 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scrt1Q99M85 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scrt1Q99M85 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Scrt1Q99M85 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scrt1Q99M85 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.2□□□□□ -0.62
Scrt1Q99M85 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Gm23270-201ENSMUST00000104055 131 ntBASIC11.2□□□□□ -0.62
Scrt1Q99M85 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Gm12502-201ENSMUST00000120197 444 ntBASIC11.2□□□□□ -0.62
Scrt1Q99M85 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Gm13570-201ENSMUST00000140763 309 ntBASIC11.2□□□□□ -0.62
Scrt1Q99M85 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.2□□□□□ -0.62
Scrt1Q99M85 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Gm4768-201ENSMUST00000206199 686 ntBASIC11.2□□□□□ -0.62
Scrt1Q99M85 Gm19208-201ENSMUST00000213861 912 ntBASIC11.2□□□□□ -0.62
Scrt1Q99M85 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.2□□□□□ -0.62
Scrt1Q99M85 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.2□□□□□ -0.62
Scrt1Q99M85 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.2□□□□□ -0.62
Scrt1Q99M85 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scrt1Q99M85 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Scrt1Q99M85 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Scrt1Q99M85 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.19□□□□□ -0.62
Scrt1Q99M85 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.19□□□□□ -0.62
Scrt1Q99M85 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms