Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm27437-201ENSMUST00000183429 107 ntBASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap3Q99LM2 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.3
Cdk5rap3Q99LM2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Cdk5rap3Q99LM2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdk5rap3Q99LM2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdk5rap3Q99LM2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdk5rap3Q99LM2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Gm11618-201ENSMUST00000117946 267 ntBASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Mir6977-201ENSMUST00000184960 64 ntBASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Gm44124-201ENSMUST00000204159 472 ntBASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Gm8463-201ENSMUST00000208573 613 ntBASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Gm45668-201ENSMUST00000211271 493 ntBASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Mir339-201ENSMUST00000083659 96 ntBASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.2□□□□□ -0.3
Cdk5rap3Q99LM2 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.19□□□□□ -0.3
Cdk5rap3Q99LM2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cdk5rap3Q99LM2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms