Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Gm15806-201ENSMUST00000120696 955 ntBASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Mir1894-201ENSMUST00000122802 81 ntBASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdhga3Q91XY5 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdhga3Q91XY5 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pcdhga3Q91XY5 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
Pcdhga3Q91XY5 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Pcdhga3Q91XY5 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Gm12138-201ENSMUST00000122180 951 ntBASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Gm6244-201ENSMUST00000178732 841 ntBASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Gm27892-201ENSMUST00000185017 106 ntBASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pcdhga3Q91XY5 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms