Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims2Q91XD2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims2Q91XD2 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.97□□□□□ -0.33
Lims2Q91XD2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Lims2Q91XD2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lims2Q91XD2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.97□□□□□ -0.33
Lims2Q91XD2 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Gm12015-201ENSMUST00000117065 843 ntBASIC12.96□□□□□ -0.33
Lims2Q91XD2 Gm15547-201ENSMUST00000122152 333 ntBASIC12.96□□□□□ -0.33
Lims2Q91XD2 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lims2Q91XD2 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lims2Q91XD2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.96□□□□□ -0.34
Lims2Q91XD2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lims2Q91XD2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lims2Q91XD2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lims2Q91XD2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lims2Q91XD2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.95□□□□□ -0.34
Lims2Q91XD2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Gm9257-201ENSMUST00000221254 232 ntBASIC12.95□□□□□ -0.34
Lims2Q91XD2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.95□□□□□ -0.34
Lims2Q91XD2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.95□□□□□ -0.34
Lims2Q91XD2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims2Q91XD2 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims2Q91XD2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims2Q91XD2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims2Q91XD2 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.94□□□□□ -0.34
Lims2Q91XD2 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims2Q91XD2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Lims2Q91XD2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lims2Q91XD2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims2Q91XD2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims2Q91XD2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
Lims2Q91XD2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims2Q91XD2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims2Q91XD2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims2Q91XD2 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Lims2Q91XD2 Gm9083-201ENSMUST00000120423 819 ntBASIC12.94□□□□□ -0.34
Lims2Q91XD2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.94□□□□□ -0.34
Lims2Q91XD2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lims2Q91XD2 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lims2Q91XD2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Lims2Q91XD2 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms