Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC16.28■□□□□ 0.2
Chmp7Q8R1T1 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 AC122197.2-201ENSMUST00000219196 1635 ntBASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Gm12314-201ENSMUST00000118104 538 ntBASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Gm11597-201ENSMUST00000121423 964 ntBASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Gm32999-201ENSMUST00000192693 562 ntBASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Aprt-ps-201ENSMUST00000212311 505 ntBASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 CT025694.1-201ENSMUST00000226188 934 ntBASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Chmp7Q8R1T1 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp7Q8R1T1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Chmp7Q8R1T1 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp7Q8R1T1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp7Q8R1T1 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp7Q8R1T1 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Gm23200-201ENSMUST00000104379 132 ntBASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC16.26■□□□□ 0.19
Chmp7Q8R1T1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Gm12176-201ENSMUST00000121420 875 ntBASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Ighv5-7-201ENSMUST00000192302 244 ntBASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Gm45598-202ENSMUST00000210719 986 ntBASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms