Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rdh1Q8CGV4 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rdh1Q8CGV4 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rdh1Q8CGV4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rdh1Q8CGV4 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rdh1Q8CGV4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rdh1Q8CGV4 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rdh1Q8CGV4 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rdh1Q8CGV4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rdh1Q8CGV4 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.38□□□□□ -0.43
Rdh1Q8CGV4 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rdh1Q8CGV4 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rdh1Q8CGV4 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rdh1Q8CGV4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.38□□□□□ -0.43
Rdh1Q8CGV4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rdh1Q8CGV4 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rdh1Q8CGV4 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rdh1Q8CGV4 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rdh1Q8CGV4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Gm27023-201ENSMUST00000182372 285 ntBASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Gm18056-201ENSMUST00000207670 568 ntBASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Gm18061-201ENSMUST00000208350 562 ntBASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Gm18063-201ENSMUST00000208529 568 ntBASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Gm18052-201ENSMUST00000208750 559 ntBASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.36□□□□□ -0.43
Rdh1Q8CGV4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms