Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Gm23363-201ENSMUST00000175024 79 ntBASIC15.74■□□□□ 0.11
Smc5Q8CG46 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.74■□□□□ 0.11
Smc5Q8CG46 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.74■□□□□ 0.11
Smc5Q8CG46 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Smc5Q8CG46 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Smc5Q8CG46 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smc5Q8CG46 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Gm8213-201ENSMUST00000118191 441 ntBASIC15.73■□□□□ 0.11
Smc5Q8CG46 Gm11637-201ENSMUST00000120601 592 ntBASIC15.73■□□□□ 0.11
Smc5Q8CG46 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC15.73■□□□□ 0.11
Smc5Q8CG46 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.73■□□□□ 0.11
Smc5Q8CG46 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Gm27701-201ENSMUST00000184498 110 ntBASIC15.73■□□□□ 0.11
Smc5Q8CG46 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.73■□□□□ 0.11
Smc5Q8CG46 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Gm8038-201ENSMUST00000164674 2044 ntBASIC15.73■□□□□ 0.11
Smc5Q8CG46 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smc5Q8CG46 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Smc5Q8CG46 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Gm7287-201ENSMUST00000205267 602 ntBASIC15.72■□□□□ 0.11
Smc5Q8CG46 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.72■□□□□ 0.11
Smc5Q8CG46 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc5Q8CG46 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Arhgef3-204ENSMUST00000225949 3198 ntBASIC15.72■□□□□ 0.11
Smc5Q8CG46 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc5Q8CG46 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smc5Q8CG46 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc5Q8CG46 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC15.71■□□□□ 0.11
Smc5Q8CG46 Gm43727-201ENSMUST00000198021 2647 ntBASIC15.71■□□□□ 0.11
Smc5Q8CG46 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc5Q8CG46 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc5Q8CG46 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc5Q8CG46 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Smc5Q8CG46 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Smc5Q8CG46 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc5Q8CG46 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc5Q8CG46 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Smc5Q8CG46 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smc5Q8CG46 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc5Q8CG46 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.71■□□□□ 0.11
Smc5Q8CG46 Gm28911-201ENSMUST00000188837 117 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms