Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc60Q8C4J0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc60Q8C4J0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc60Q8C4J0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc60Q8C4J0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc60Q8C4J0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc60Q8C4J0 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc60Q8C4J0 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc60Q8C4J0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc60Q8C4J0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc60Q8C4J0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc60Q8C4J0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC16.26■□□□□ 0.19
Ccdc60Q8C4J0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Gm9947-201ENSMUST00000067599 2920 ntBASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Gm37827-201ENSMUST00000194486 1542 ntBASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Gm12329-201ENSMUST00000120829 1007 ntBASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Gm43133-201ENSMUST00000197472 463 ntBASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Gm18054-201ENSMUST00000207539 555 ntBASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 AC140406.1-201ENSMUST00000226481 465 ntBASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc60Q8C4J0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Gm17420-201ENSMUST00000164753 153 ntBASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Gm5781-201ENSMUST00000219792 443 ntBASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 AC133598.1-201ENSMUST00000224327 660 ntBASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 AC132317.1-201ENSMUST00000227227 962 ntBASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc60Q8C4J0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Gm43858-201ENSMUST00000199418 1778 ntBASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc60Q8C4J0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms