Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Gm4984-201ENSMUST00000115987 360 ntBASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Gm13813-201ENSMUST00000120998 787 ntBASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Gm22121-201ENSMUST00000175148 54 ntBASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Gm27682-201ENSMUST00000183930 110 ntBASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Gm6266-201ENSMUST00000203844 806 ntBASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Mir339-201ENSMUST00000083659 96 ntBASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf3Q8C120 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Gm32025-201ENSMUST00000217960 307 ntBASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf3Q8C120 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
Sh3rf3Q8C120 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sh3rf3Q8C120 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sh3rf3Q8C120 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sh3rf3Q8C120 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sh3rf3Q8C120 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sh3rf3Q8C120 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.28
Sh3rf3Q8C120 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Sh3rf3Q8C120 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sh3rf3Q8C120 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Gm11637-201ENSMUST00000120601 592 ntBASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Gm19163-201ENSMUST00000223313 780 ntBASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms