Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.62□□□□□ -0.39
Ubp1Q811S7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Gm4768-201ENSMUST00000206199 686 ntBASIC12.62□□□□□ -0.39
Ubp1Q811S7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.62□□□□□ -0.39
Ubp1Q811S7 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.62□□□□□ -0.39
Ubp1Q811S7 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ubp1Q811S7 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.61□□□□□ -0.39
Ubp1Q811S7 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.61□□□□□ -0.39
Ubp1Q811S7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ubp1Q811S7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.61□□□□□ -0.39
Ubp1Q811S7 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Ubp1Q811S7 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ubp1Q811S7 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.61□□□□□ -0.39
Ubp1Q811S7 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.61□□□□□ -0.39
Ubp1Q811S7 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubp1Q811S7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.6□□□□□ -0.39
Ubp1Q811S7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ubp1Q811S7 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubp1Q811S7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ubp1Q811S7 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.6□□□□□ -0.39
Ubp1Q811S7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms