Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.44□□□□□ -0.42
Trim50Q810I2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trim50Q810I2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim50Q810I2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim50Q810I2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim50Q810I2 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trim50Q810I2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Trim50Q810I2 Gm13813-201ENSMUST00000120998 787 ntBASIC12.44□□□□□ -0.42
Trim50Q810I2 Gm1335-201ENSMUST00000121653 386 ntBASIC12.44□□□□□ -0.42
Trim50Q810I2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim50Q810I2 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.44□□□□□ -0.42
Trim50Q810I2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim50Q810I2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.44□□□□□ -0.42
Trim50Q810I2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Trim50Q810I2 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.44□□□□□ -0.42
Trim50Q810I2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.44□□□□□ -0.42
Trim50Q810I2 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.44□□□□□ -0.42
Trim50Q810I2 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.44□□□□□ -0.42
Trim50Q810I2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.44□□□□□ -0.42
Trim50Q810I2 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim50Q810I2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Trim50Q810I2 Gm19163-201ENSMUST00000223313 780 ntBASIC12.44□□□□□ -0.42
Trim50Q810I2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.44□□□□□ -0.42
Trim50Q810I2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim50Q810I2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim50Q810I2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.43□□□□□ -0.42
Trim50Q810I2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Trim50Q810I2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
Trim50Q810I2 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Gm14127-201ENSMUST00000117906 678 ntBASIC12.43□□□□□ -0.42
Trim50Q810I2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.43□□□□□ -0.42
Trim50Q810I2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.43□□□□□ -0.42
Trim50Q810I2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.43□□□□□ -0.42
Trim50Q810I2 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.43□□□□□ -0.42
Trim50Q810I2 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Gm43818-201ENSMUST00000200605 466 ntBASIC12.43□□□□□ -0.42
Trim50Q810I2 Gm4768-201ENSMUST00000206199 686 ntBASIC12.43□□□□□ -0.42
Trim50Q810I2 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.43□□□□□ -0.42
Trim50Q810I2 Gm32025-201ENSMUST00000217960 307 ntBASIC12.43□□□□□ -0.42
Trim50Q810I2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Gm25857-201ENSMUST00000082788 129 ntBASIC12.43□□□□□ -0.42
Trim50Q810I2 Mir339-201ENSMUST00000083659 96 ntBASIC12.43□□□□□ -0.42
Trim50Q810I2 Gm10268-201ENSMUST00000085340 555 ntBASIC12.43□□□□□ -0.42
Trim50Q810I2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trim50Q810I2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim50Q810I2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim50Q810I2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms