Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Grk6-205ENSMUST00000224653 2976 ntBASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Gm13316-201ENSMUST00000140537 691 ntBASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Gm26083-201ENSMUST00000157904 193 ntBASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh19Q80TF3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh19Q80TF3 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh19Q80TF3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh19Q80TF3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
Pcdh19Q80TF3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh19Q80TF3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh19Q80TF3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Pcdh19Q80TF3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh19Q80TF3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh19Q80TF3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh19Q80TF3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh19Q80TF3 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh19Q80TF3 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdh19Q80TF3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Gm6754-201ENSMUST00000117124 913 ntBASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Gm44882-201ENSMUST00000205702 802 ntBASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Gm45925-201ENSMUST00000218882 744 ntBASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdh19Q80TF3 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms