Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Gm11618-201ENSMUST00000117946 267 ntBASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Gm9083-201ENSMUST00000120423 819 ntBASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Mir1943-201ENSMUST00000158276 73 ntBASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Gm5070-201ENSMUST00000177599 862 ntBASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Prpf38bQ80SY5 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Gm11591-201ENSMUST00000120063 702 ntBASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Gm6222-202ENSMUST00000182143 629 ntBASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.4□□□□□ -0.26
Prpf38bQ80SY5 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Prpf38bQ80SY5 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.27
Prpf38bQ80SY5 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Gm15276-201ENSMUST00000145953 498 ntBASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Gm24548-201ENSMUST00000158650 108 ntBASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Gm44545-201ENSMUST00000208262 746 ntBASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms