Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh8Q7TSK3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Gm32025-201ENSMUST00000217960 307 ntBASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Morn2-202ENSMUST00000227729 656 ntBASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh8Q7TSK3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Mir877-201ENSMUST00000104738 85 ntBASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Gm14704-201ENSMUST00000120300 874 ntBASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Gm4857-201ENSMUST00000192718 785 ntBASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms