Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC16.33■□□□□ 0.21
Chd4Q6PDQ2 Gm9797-202ENSMUST00000218003 294 ntBASIC16.33■□□□□ 0.21
Chd4Q6PDQ2 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Chd4Q6PDQ2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chd4Q6PDQ2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chd4Q6PDQ2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Chd4Q6PDQ2 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chd4Q6PDQ2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Chd4Q6PDQ2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd4Q6PDQ2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chd4Q6PDQ2 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd4Q6PDQ2 Gm14058-201ENSMUST00000116082 735 ntBASIC16.33■□□□□ 0.2
Chd4Q6PDQ2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chd4Q6PDQ2 Gm6397-201ENSMUST00000161973 1069 ntBASIC16.33■□□□□ 0.2
Chd4Q6PDQ2 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Chd4Q6PDQ2 Gm5732-201ENSMUST00000182596 1007 ntBASIC16.33■□□□□ 0.2
Chd4Q6PDQ2 Gm8343-201ENSMUST00000182705 994 ntBASIC16.33■□□□□ 0.2
Chd4Q6PDQ2 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd4Q6PDQ2 Gm7551-201ENSMUST00000089593 1074 ntBASIC16.33■□□□□ 0.2
Chd4Q6PDQ2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Mir680-2-201ENSMUST00000102163 110 ntBASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Gm23251-201ENSMUST00000103773 110 ntBASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 D9Wsu149-201ENSMUST00000214169 594 ntBASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Gm4797-201ENSMUST00000219075 1283 ntBASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd4Q6PDQ2 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Gm17931-201ENSMUST00000208132 634 ntBASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Gm8566-201ENSMUST00000120174 465 ntBASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 AC129219.2-201ENSMUST00000224324 701 ntBASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Chd4Q6PDQ2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Chd4Q6PDQ2 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd4Q6PDQ2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd4Q6PDQ2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms