Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Zfp248Q640N4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC9.71□□□□□ -0.86
Zfp248Q640N4 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.71□□□□□ -0.86
Zfp248Q640N4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Zfp248Q640N4 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC9.71□□□□□ -0.86
Zfp248Q640N4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Gm45266-201ENSMUST00000210111 2173 ntBASIC9.71□□□□□ -0.86
Zfp248Q640N4 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC9.71□□□□□ -0.86
Zfp248Q640N4 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 CT573086.2-201ENSMUST00000227277 4992 ntBASIC9.7□□□□□ -0.86
Zfp248Q640N4 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Gm43677-201ENSMUST00000198098 2378 ntBASIC9.7□□□□□ -0.86
Zfp248Q640N4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Gm12091-201ENSMUST00000146791 830 ntBASIC9.7□□□□□ -0.86
Zfp248Q640N4 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Gm8515-201ENSMUST00000194852 576 ntBASIC9.7□□□□□ -0.86
Zfp248Q640N4 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Gm8463-201ENSMUST00000208573 613 ntBASIC9.7□□□□□ -0.86
Zfp248Q640N4 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Gm6210-201ENSMUST00000204734 1942 ntBASIC9.7□□□□□ -0.86
Zfp248Q640N4 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Zfp248Q640N4 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC9.69□□□□□ -0.86
Zfp248Q640N4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC9.69□□□□□ -0.86
Zfp248Q640N4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Zfp248Q640N4 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Zfp248Q640N4 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Zfp248Q640N4 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Zfp248Q640N4 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Zfp248Q640N4 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Zfp248Q640N4 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 115.8 ms