Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Col11a1Q61245 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a1Q61245 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a1Q61245 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a1Q61245 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a1Q61245 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col11a1Q61245 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Col11a1Q61245 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.97□□□□□ -0.17
Col11a1Q61245 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Col11a1Q61245 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col11a1Q61245 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.97□□□□□ -0.17
Col11a1Q61245 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Col11a1Q61245 Gm27910-201ENSMUST00000185004 107 ntBASIC13.97□□□□□ -0.17
Col11a1Q61245 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.97□□□□□ -0.17
Col11a1Q61245 Gm9111-201ENSMUST00000219394 709 ntBASIC13.97□□□□□ -0.17
Col11a1Q61245 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.97□□□□□ -0.17
Col11a1Q61245 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Col11a1Q61245 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Col11a1Q61245 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Col11a1Q61245 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.97□□□□□ -0.17
Col11a1Q61245 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.97□□□□□ -0.17
Col11a1Q61245 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.97□□□□□ -0.17
Col11a1Q61245 Gm38151-201ENSMUST00000195085 289 ntBASIC13.97□□□□□ -0.17
Col11a1Q61245 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.97□□□□□ -0.17
Col11a1Q61245 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.97□□□□□ -0.17
Col11a1Q61245 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.97□□□□□ -0.17
Col11a1Q61245 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col11a1Q61245 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a1Q61245 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.96□□□□□ -0.17
Col11a1Q61245 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a1Q61245 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a1Q61245 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a1Q61245 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.96□□□□□ -0.17
Col11a1Q61245 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a1Q61245 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a1Q61245 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a1Q61245 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a1Q61245 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a1Q61245 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.96□□□□□ -0.17
Col11a1Q61245 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a1Q61245 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a1Q61245 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a1Q61245 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Col11a1Q61245 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.96□□□□□ -0.17
Col11a1Q61245 Gm11663-201ENSMUST00000117888 290 ntBASIC13.96□□□□□ -0.17
Col11a1Q61245 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.96□□□□□ -0.17
Col11a1Q61245 Gm18367-201ENSMUST00000176139 600 ntBASIC13.96□□□□□ -0.17
Col11a1Q61245 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a1Q61245 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.96□□□□□ -0.17
Col11a1Q61245 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a1Q61245 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Col11a1Q61245 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a1Q61245 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col11a1Q61245 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Col11a1Q61245 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col11a1Q61245 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col11a1Q61245 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a1Q61245 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a1Q61245 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Col11a1Q61245 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a1Q61245 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a1Q61245 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a1Q61245 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a1Q61245 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a1Q61245 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.95□□□□□ -0.18
Col11a1Q61245 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.95□□□□□ -0.18
Col11a1Q61245 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a1Q61245 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col11a1Q61245 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.95□□□□□ -0.18
Col11a1Q61245 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a1Q61245 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.95□□□□□ -0.18
Col11a1Q61245 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.95□□□□□ -0.18
Col11a1Q61245 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.95□□□□□ -0.18
Col11a1Q61245 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.95□□□□□ -0.18
Col11a1Q61245 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a1Q61245 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a1Q61245 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a1Q61245 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col11a1Q61245 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Col11a1Q61245 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms