Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.26□□□□□ -0.45
ClpbQ60649 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ClpbQ60649 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
ClpbQ60649 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.26□□□□□ -0.45
ClpbQ60649 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.26□□□□□ -0.45
ClpbQ60649 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
ClpbQ60649 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.26□□□□□ -0.45
ClpbQ60649 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.26□□□□□ -0.45
ClpbQ60649 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.26□□□□□ -0.45
ClpbQ60649 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 Gm10268-201ENSMUST00000085340 555 ntBASIC12.26□□□□□ -0.45
ClpbQ60649 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
ClpbQ60649 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ClpbQ60649 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.26□□□□□ -0.45
ClpbQ60649 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.26□□□□□ -0.45
ClpbQ60649 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.26□□□□□ -0.45
ClpbQ60649 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
ClpbQ60649 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
ClpbQ60649 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpbQ60649 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ClpbQ60649 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
ClpbQ60649 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.25□□□□□ -0.45
ClpbQ60649 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.25□□□□□ -0.45
ClpbQ60649 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ClpbQ60649 Gm27682-201ENSMUST00000183930 110 ntBASIC12.25□□□□□ -0.45
ClpbQ60649 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.25□□□□□ -0.45
ClpbQ60649 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ClpbQ60649 Gm6458-201ENSMUST00000211573 635 ntBASIC12.25□□□□□ -0.45
ClpbQ60649 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.25□□□□□ -0.45
ClpbQ60649 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.25□□□□□ -0.45
ClpbQ60649 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
ClpbQ60649 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.25□□□□□ -0.45
ClpbQ60649 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.25□□□□□ -0.45
ClpbQ60649 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ClpbQ60649 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ClpbQ60649 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ClpbQ60649 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ClpbQ60649 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
ClpbQ60649 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClpbQ60649 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClpbQ60649 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ClpbQ60649 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.24□□□□□ -0.45
ClpbQ60649 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ClpbQ60649 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClpbQ60649 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
ClpbQ60649 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.24□□□□□ -0.45
ClpbQ60649 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClpbQ60649 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ClpbQ60649 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClpbQ60649 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ClpbQ60649 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClpbQ60649 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.24□□□□□ -0.45
ClpbQ60649 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
ClpbQ60649 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ClpbQ60649 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.24□□□□□ -0.45
ClpbQ60649 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ClpbQ60649 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
ClpbQ60649 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms