Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Bbof1Q3V079 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Bbof1Q3V079 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Bbof1Q3V079 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Bbof1Q3V079 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Bbof1Q3V079 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Bbof1Q3V079 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Bbof1Q3V079 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Bbof1Q3V079 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Bbof1Q3V079 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Bbof1Q3V079 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.02□□□□□ -0.16
Bbof1Q3V079 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.02□□□□□ -0.16
Bbof1Q3V079 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.02□□□□□ -0.16
Bbof1Q3V079 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Bbof1Q3V079 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.02□□□□□ -0.17
Bbof1Q3V079 Gm12203-201ENSMUST00000118235 598 ntBASIC14.02□□□□□ -0.17
Bbof1Q3V079 Gm12209-201ENSMUST00000120089 596 ntBASIC14.02□□□□□ -0.17
Bbof1Q3V079 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Bbof1Q3V079 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Bbof1Q3V079 Gm37922-201ENSMUST00000195596 455 ntBASIC14.02□□□□□ -0.17
Bbof1Q3V079 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Bbof1Q3V079 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Bbof1Q3V079 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Bbof1Q3V079 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Bbof1Q3V079 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.02□□□□□ -0.17
Bbof1Q3V079 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Bbof1Q3V079 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Bbof1Q3V079 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Bbof1Q3V079 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Bbof1Q3V079 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Bbof1Q3V079 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Bbof1Q3V079 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Bbof1Q3V079 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.01□□□□□ -0.17
Bbof1Q3V079 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.01□□□□□ -0.17
Bbof1Q3V079 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.01□□□□□ -0.17
Bbof1Q3V079 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bbof1Q3V079 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14□□□□□ -0.17
Bbof1Q3V079 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14□□□□□ -0.17
Bbof1Q3V079 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Bbof1Q3V079 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14□□□□□ -0.17
Bbof1Q3V079 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 Gm38049-201ENSMUST00000195698 1372 ntBASIC14□□□□□ -0.17
Bbof1Q3V079 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Bbof1Q3V079 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14□□□□□ -0.17
Bbof1Q3V079 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14□□□□□ -0.17
Bbof1Q3V079 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14□□□□□ -0.17
Bbof1Q3V079 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14□□□□□ -0.17
Bbof1Q3V079 Mir7221-201ENSMUST00000184009 72 ntBASIC14□□□□□ -0.17
Bbof1Q3V079 Gm18062-201ENSMUST00000208020 547 ntBASIC14□□□□□ -0.17
Bbof1Q3V079 Gm18055-201ENSMUST00000208254 547 ntBASIC14□□□□□ -0.17
Bbof1Q3V079 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14□□□□□ -0.17
Bbof1Q3V079 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14□□□□□ -0.17
Bbof1Q3V079 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Bbof1Q3V079 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Bbof1Q3V079 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms