Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Gm6867-201ENSMUST00000219165 425 ntBASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.79□□□□□ -0.36
Fam196aQ3USH1 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Gm12628-201ENSMUST00000122193 382 ntBASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Mir7686-201ENSMUST00000200604 57 ntBASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Gm4482-201ENSMUST00000200876 742 ntBASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Gm3793-201ENSMUST00000204973 672 ntBASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.79□□□□□ -0.36
Fam196aQ3USH1 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.79□□□□□ -0.36
Fam196aQ3USH1 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.79□□□□□ -0.36
Fam196aQ3USH1 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Fam196aQ3USH1 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Gm15573-201ENSMUST00000119487 540 ntBASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Gm12196-201ENSMUST00000120954 262 ntBASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Mir7677-201ENSMUST00000184226 67 ntBASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Gm39404-201ENSMUST00000216350 313 ntBASIC12.78□□□□□ -0.36
Fam196aQ3USH1 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Fam196aQ3USH1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms