Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.23□□□□□ -0.45
Hoxc4Q08624 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Gm14130-201ENSMUST00000118417 987 ntBASIC12.23□□□□□ -0.45
Hoxc4Q08624 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.23□□□□□ -0.45
Hoxc4Q08624 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.23□□□□□ -0.45
Hoxc4Q08624 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.23□□□□□ -0.45
Hoxc4Q08624 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.23□□□□□ -0.45
Hoxc4Q08624 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Mir433-201ENSMUST00000093564 124 ntBASIC12.23□□□□□ -0.45
Hoxc4Q08624 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hoxc4Q08624 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hoxc4Q08624 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.22□□□□□ -0.45
Hoxc4Q08624 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.22□□□□□ -0.45
Hoxc4Q08624 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.22□□□□□ -0.45
Hoxc4Q08624 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Gm2383-201ENSMUST00000181461 807 ntBASIC12.22□□□□□ -0.45
Hoxc4Q08624 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.22□□□□□ -0.45
Hoxc4Q08624 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.22□□□□□ -0.45
Hoxc4Q08624 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hoxc4Q08624 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms