Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Msx3P70354 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.12□□□□□ -0.31
Msx3P70354 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.12□□□□□ -0.31
Msx3P70354 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Msx3P70354 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.12□□□□□ -0.31
Msx3P70354 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Msx3P70354 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Msx3P70354 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.11□□□□□ -0.31
Msx3P70354 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.11□□□□□ -0.31
Msx3P70354 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Msx3P70354 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.11□□□□□ -0.31
Msx3P70354 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Msx3P70354 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.11□□□□□ -0.31
Msx3P70354 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Msx3P70354 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.11□□□□□ -0.31
Msx3P70354 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.11□□□□□ -0.31
Msx3P70354 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Msx3P70354 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.11□□□□□ -0.31
Msx3P70354 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Gm4768-201ENSMUST00000206199 686 ntBASIC13.11□□□□□ -0.31
Msx3P70354 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.11□□□□□ -0.31
Msx3P70354 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Msx3P70354 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Msx3P70354 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Msx3P70354 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Msx3P70354 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.1□□□□□ -0.31
Msx3P70354 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.1□□□□□ -0.31
Msx3P70354 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 Snord83b-201ENSMUST00000104546 94 ntBASIC13.1□□□□□ -0.31
Msx3P70354 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.1□□□□□ -0.31
Msx3P70354 Gm27847-201ENSMUST00000183711 107 ntBASIC13.1□□□□□ -0.31
Msx3P70354 Gm27375-201ENSMUST00000183799 107 ntBASIC13.1□□□□□ -0.31
Msx3P70354 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.1□□□□□ -0.31
Msx3P70354 Gm19163-201ENSMUST00000223313 780 ntBASIC13.1□□□□□ -0.31
Msx3P70354 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.1□□□□□ -0.31
Msx3P70354 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.1□□□□□ -0.31
Msx3P70354 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Msx3P70354 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Msx3P70354 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.1□□□□□ -0.31
Msx3P70354 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Msx3P70354 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Msx3P70354 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Msx3P70354 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Msx3P70354 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.09□□□□□ -0.31
Msx3P70354 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx3P70354 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx3P70354 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx3P70354 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx3P70354 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx3P70354 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Msx3P70354 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Msx3P70354 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.09□□□□□ -0.31
Msx3P70354 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms