Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Nphp4P59240 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC17.1■□□□□ 0.33
Nphp4P59240 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC17.1■□□□□ 0.33
Nphp4P59240 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC17.1■□□□□ 0.33
Nphp4P59240 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC17.1■□□□□ 0.33
Nphp4P59240 Gm7848-201ENSMUST00000210739 718 ntBASIC17.1■□□□□ 0.33
Nphp4P59240 Gm5369-201ENSMUST00000217499 588 ntBASIC17.1■□□□□ 0.33
Nphp4P59240 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC17.1■□□□□ 0.33
Nphp4P59240 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nphp4P59240 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nphp4P59240 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC17.09■□□□□ 0.33
Nphp4P59240 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nphp4P59240 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nphp4P59240 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nphp4P59240 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Nphp4P59240 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC17.09■□□□□ 0.33
Nphp4P59240 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nphp4P59240 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nphp4P59240 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nphp4P59240 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC17.09■□□□□ 0.33
Nphp4P59240 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nphp4P59240 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nphp4P59240 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC17.09■□□□□ 0.33
Nphp4P59240 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC17.09■□□□□ 0.33
Nphp4P59240 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC17.09■□□□□ 0.33
Nphp4P59240 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nphp4P59240 Gm5455-201ENSMUST00000058710 715 ntBASIC17.09■□□□□ 0.33
Nphp4P59240 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nphp4P59240 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nphp4P59240 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC17.09■□□□□ 0.33
Nphp4P59240 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Nphp4P59240 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Nphp4P59240 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nphp4P59240 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nphp4P59240 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nphp4P59240 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Nphp4P59240 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nphp4P59240 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nphp4P59240 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nphp4P59240 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nphp4P59240 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nphp4P59240 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nphp4P59240 Gm13812-201ENSMUST00000118061 1347 ntBASIC17.08■□□□□ 0.33
Nphp4P59240 Gm13810-201ENSMUST00000118584 1347 ntBASIC17.08■□□□□ 0.33
Nphp4P59240 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nphp4P59240 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC17.08■□□□□ 0.32
Nphp4P59240 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nphp4P59240 Gm15515-201ENSMUST00000117827 822 ntBASIC17.08■□□□□ 0.32
Nphp4P59240 Gm15711-201ENSMUST00000118889 535 ntBASIC17.08■□□□□ 0.32
Nphp4P59240 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC17.08■□□□□ 0.32
Nphp4P59240 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC17.08■□□□□ 0.32
Nphp4P59240 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
Nphp4P59240 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
Nphp4P59240 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nphp4P59240 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nphp4P59240 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nphp4P59240 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nphp4P59240 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Nphp4P59240 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nphp4P59240 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nphp4P59240 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Nphp4P59240 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.08■□□□□ 0.32
Nphp4P59240 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nphp4P59240 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nphp4P59240 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Nphp4P59240 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nphp4P59240 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nphp4P59240 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC17.07■□□□□ 0.32
Nphp4P59240 Gm6039-201ENSMUST00000121667 1250 ntBASIC17.07■□□□□ 0.32
Nphp4P59240 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC17.07■□□□□ 0.32
Nphp4P59240 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nphp4P59240 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC17.07■□□□□ 0.32
Nphp4P59240 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC17.07■□□□□ 0.32
Nphp4P59240 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC17.07■□□□□ 0.32
Nphp4P59240 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC17.07■□□□□ 0.32
Nphp4P59240 AC153954.1-201ENSMUST00000216959 255 ntBASIC17.07■□□□□ 0.32
Nphp4P59240 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nphp4P59240 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nphp4P59240 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nphp4P59240 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nphp4P59240 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nphp4P59240 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC17.07■□□□□ 0.32
Nphp4P59240 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Nphp4P59240 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC17.07■□□□□ 0.32
Nphp4P59240 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nphp4P59240 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nphp4P59240 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nphp4P59240 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nphp4P59240 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms