Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.24□□□□□ -0.13
Tpm1P58771 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Tpm1P58771 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm1P58771 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Tpm1P58771 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Tpm1P58771 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.23□□□□□ -0.13
Tpm1P58771 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.23□□□□□ -0.13
Tpm1P58771 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.23□□□□□ -0.13
Tpm1P58771 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.23□□□□□ -0.13
Tpm1P58771 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Gm9522-201ENSMUST00000182394 926 ntBASIC14.23□□□□□ -0.13
Tpm1P58771 Gm27702-201ENSMUST00000184512 56 ntBASIC14.23□□□□□ -0.13
Tpm1P58771 Gm5279-201ENSMUST00000199575 745 ntBASIC14.23□□□□□ -0.13
Tpm1P58771 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tpm1P58771 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.23□□□□□ -0.13
Tpm1P58771 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.23□□□□□ -0.13
Tpm1P58771 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Tpm1P58771 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm1P58771 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tpm1P58771 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.22□□□□□ -0.13
Tpm1P58771 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tpm1P58771 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tpm1P58771 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Tpm1P58771 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tpm1P58771 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.22□□□□□ -0.13
Tpm1P58771 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Tpm1P58771 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.22□□□□□ -0.13
Tpm1P58771 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.22□□□□□ -0.13
Tpm1P58771 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.22□□□□□ -0.13
Tpm1P58771 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm1P58771 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm1P58771 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm1P58771 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm1P58771 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm1P58771 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.21□□□□□ -0.13
Tpm1P58771 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm1P58771 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.21□□□□□ -0.13
Tpm1P58771 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.21□□□□□ -0.13
Tpm1P58771 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm1P58771 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm1P58771 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm1P58771 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm1P58771 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.21□□□□□ -0.13
Tpm1P58771 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm1P58771 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm1P58771 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Tpm1P58771 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.21□□□□□ -0.13
Tpm1P58771 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm1P58771 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.21□□□□□ -0.13
Tpm1P58771 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.21□□□□□ -0.13
Tpm1P58771 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.21□□□□□ -0.13
Tpm1P58771 Gm26315-201ENSMUST00000083890 321 ntBASIC14.21□□□□□ -0.13
Tpm1P58771 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC14.21□□□□□ -0.13
Tpm1P58771 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm1P58771 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.21□□□□□ -0.13
Tpm1P58771 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm1P58771 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tpm1P58771 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.21□□□□□ -0.14
Tpm1P58771 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms