Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cldn18P56857 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.42□□□□□ -0.58
Cldn18P56857 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.42□□□□□ -0.58
Cldn18P56857 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Cldn18P56857 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.42□□□□□ -0.58
Cldn18P56857 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.42□□□□□ -0.58
Cldn18P56857 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cldn18P56857 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cldn18P56857 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cldn18P56857 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.42□□□□□ -0.58
Cldn18P56857 Gm24548-201ENSMUST00000158650 108 ntBASIC11.42□□□□□ -0.58
Cldn18P56857 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 Gm43133-201ENSMUST00000197472 463 ntBASIC11.42□□□□□ -0.58
Cldn18P56857 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.42□□□□□ -0.58
Cldn18P56857 Gm45880-201ENSMUST00000213041 853 ntBASIC11.42□□□□□ -0.58
Cldn18P56857 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.42□□□□□ -0.58
Cldn18P56857 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.42□□□□□ -0.58
Cldn18P56857 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cldn18P56857 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cldn18P56857 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.42□□□□□ -0.58
Cldn18P56857 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cldn18P56857 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cldn18P56857 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.42□□□□□ -0.58
Cldn18P56857 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn18P56857 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.41□□□□□ -0.58
Cldn18P56857 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cldn18P56857 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Cldn18P56857 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Gm27572-201ENSMUST00000183702 255 ntBASIC11.41□□□□□ -0.58
Cldn18P56857 Gm18054-201ENSMUST00000207539 555 ntBASIC11.41□□□□□ -0.58
Cldn18P56857 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.41□□□□□ -0.58
Cldn18P56857 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.41□□□□□ -0.58
Cldn18P56857 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.41□□□□□ -0.58
Cldn18P56857 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Gm9823-201ENSMUST00000051212 327 ntBASIC11.41□□□□□ -0.58
Cldn18P56857 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cldn18P56857 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.41□□□□□ -0.58
Cldn18P56857 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.41□□□□□ -0.58
Cldn18P56857 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Cldn18P56857 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cldn18P56857 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Daam2-202ENSMUST00000224595 1926 ntBASIC11.41□□□□□ -0.58
Cldn18P56857 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Cldn18P56857 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn18P56857 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cldn18P56857 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn18P56857 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cldn18P56857 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.4□□□□□ -0.58
Cldn18P56857 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms