Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Rmrp-201ENSMUST00000157463 271 ntBASIC12.95□□□□□ -0.34
Ddx6P54823 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx6P54823 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.95□□□□□ -0.34
Ddx6P54823 Gm25700-201ENSMUST00000177693 110 ntBASIC12.95□□□□□ -0.34
Ddx6P54823 Gm27341-201ENSMUST00000183570 106 ntBASIC12.95□□□□□ -0.34
Ddx6P54823 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx6P54823 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx6P54823 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx6P54823 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx6P54823 Gm39404-201ENSMUST00000216350 313 ntBASIC12.95□□□□□ -0.34
Ddx6P54823 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.95□□□□□ -0.34
Ddx6P54823 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.95□□□□□ -0.34
Ddx6P54823 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx6P54823 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx6P54823 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.95□□□□□ -0.34
Ddx6P54823 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Ddx6P54823 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx6P54823 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx6P54823 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx6P54823 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.95□□□□□ -0.34
Ddx6P54823 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx6P54823 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx6P54823 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx6P54823 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx6P54823 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx6P54823 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ddx6P54823 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx6P54823 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Ddx6P54823 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ddx6P54823 Gm13996-201ENSMUST00000118456 430 ntBASIC12.94□□□□□ -0.34
Ddx6P54823 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Ddx6P54823 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Ddx6P54823 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ddx6P54823 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.94□□□□□ -0.34
Ddx6P54823 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.94□□□□□ -0.34
Ddx6P54823 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.94□□□□□ -0.34
Ddx6P54823 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.94□□□□□ -0.34
Ddx6P54823 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.94□□□□□ -0.34
Ddx6P54823 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx6P54823 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ddx6P54823 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ddx6P54823 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx6P54823 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ddx6P54823 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Ddx6P54823 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.94□□□□□ -0.34
Ddx6P54823 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.94□□□□□ -0.34
Ddx6P54823 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx6P54823 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Ddx6P54823 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.93□□□□□ -0.34
Ddx6P54823 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.93□□□□□ -0.34
Ddx6P54823 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ddx6P54823 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Ddx6P54823 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.93□□□□□ -0.34
Ddx6P54823 Gm7857-201ENSMUST00000117957 358 ntBASIC12.93□□□□□ -0.34
Ddx6P54823 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.93□□□□□ -0.34
Ddx6P54823 Gm11597-201ENSMUST00000121423 964 ntBASIC12.93□□□□□ -0.34
Ddx6P54823 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 Gm43138-201ENSMUST00000199123 708 ntBASIC12.93□□□□□ -0.34
Ddx6P54823 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.93□□□□□ -0.34
Ddx6P54823 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Ddx6P54823 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.93□□□□□ -0.34
Ddx6P54823 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx6P54823 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms