Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.61□□□□□ -0.39
Pdx1P52946 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.61□□□□□ -0.39
Pdx1P52946 Gm5370-201ENSMUST00000187187 574 ntBASIC12.61□□□□□ -0.39
Pdx1P52946 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.61□□□□□ -0.39
Pdx1P52946 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.61□□□□□ -0.39
Pdx1P52946 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.61□□□□□ -0.39
Pdx1P52946 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.61□□□□□ -0.39
Pdx1P52946 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pdx1P52946 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdx1P52946 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pdx1P52946 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.6□□□□□ -0.39
Pdx1P52946 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Gm5187-201ENSMUST00000117317 991 ntBASIC12.6□□□□□ -0.39
Pdx1P52946 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.6□□□□□ -0.39
Pdx1P52946 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.6□□□□□ -0.39
Pdx1P52946 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.6□□□□□ -0.39
Pdx1P52946 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.6□□□□□ -0.39
Pdx1P52946 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.6□□□□□ -0.39
Pdx1P52946 Gm16296-201ENSMUST00000159905 325 ntBASIC12.6□□□□□ -0.39
Pdx1P52946 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Gm3890-201ENSMUST00000182416 207 ntBASIC12.6□□□□□ -0.39
Pdx1P52946 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Gm37424-201ENSMUST00000191727 561 ntBASIC12.6□□□□□ -0.39
Pdx1P52946 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.6□□□□□ -0.39
Pdx1P52946 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.6□□□□□ -0.39
Pdx1P52946 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.6□□□□□ -0.39
Pdx1P52946 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Pdx1P52946 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.6□□□□□ -0.39
Pdx1P52946 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.6□□□□□ -0.39
Pdx1P52946 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pdx1P52946 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pdx1P52946 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.6□□□□□ -0.39
Pdx1P52946 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdx1P52946 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.59□□□□□ -0.39
Pdx1P52946 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Pdx1P52946 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pdx1P52946 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.59□□□□□ -0.39
Pdx1P52946 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.59□□□□□ -0.39
Pdx1P52946 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Pdx1P52946 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pdx1P52946 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.59□□□□□ -0.39
Pdx1P52946 Gm12957-201ENSMUST00000117835 377 ntBASIC12.59□□□□□ -0.39
Pdx1P52946 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.59□□□□□ -0.39
Pdx1P52946 Gm12502-201ENSMUST00000120197 444 ntBASIC12.59□□□□□ -0.39
Pdx1P52946 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms