Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.04□□□□□ -0.32
ClgnP52194 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ClgnP52194 Gm10686-201ENSMUST00000215389 3247 ntBASIC13.04□□□□□ -0.32
ClgnP52194 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
ClgnP52194 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ClgnP52194 Gm14350-201ENSMUST00000116642 640 ntBASIC13.04□□□□□ -0.32
ClgnP52194 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.04□□□□□ -0.32
ClgnP52194 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.04□□□□□ -0.32
ClgnP52194 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.04□□□□□ -0.32
ClgnP52194 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
ClgnP52194 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
ClgnP52194 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.04□□□□□ -0.32
ClgnP52194 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClgnP52194 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.04□□□□□ -0.32
ClgnP52194 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
ClgnP52194 AC129336.1-201ENSMUST00000220224 2277 ntBASIC13.04□□□□□ -0.32
ClgnP52194 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ClgnP52194 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.03□□□□□ -0.32
ClgnP52194 Gm11478-201ENSMUST00000117851 599 ntBASIC13.03□□□□□ -0.32
ClgnP52194 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Gm6244-201ENSMUST00000178732 841 ntBASIC13.03□□□□□ -0.32
ClgnP52194 Gm24196-201ENSMUST00000179161 110 ntBASIC13.03□□□□□ -0.32
ClgnP52194 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.03□□□□□ -0.32
ClgnP52194 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.03□□□□□ -0.32
ClgnP52194 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ClgnP52194 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.03□□□□□ -0.32
ClgnP52194 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.03□□□□□ -0.32
ClgnP52194 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClgnP52194 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.03□□□□□ -0.32
ClgnP52194 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.03□□□□□ -0.32
ClgnP52194 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClgnP52194 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.02□□□□□ -0.32
ClgnP52194 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClgnP52194 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClgnP52194 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ClgnP52194 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClgnP52194 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClgnP52194 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClgnP52194 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ClgnP52194 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClgnP52194 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.02□□□□□ -0.33
ClgnP52194 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ClgnP52194 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClgnP52194 Gm11618-201ENSMUST00000117946 267 ntBASIC13.02□□□□□ -0.33
ClgnP52194 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.02□□□□□ -0.33
ClgnP52194 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.02□□□□□ -0.33
ClgnP52194 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ClgnP52194 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ClgnP52194 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClgnP52194 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClgnP52194 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms