Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gli1P47806 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gli1P47806 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.48□□□□□ -0.41
Gli1P47806 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gli1P47806 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gli1P47806 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.47□□□□□ -0.41
Gli1P47806 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.47□□□□□ -0.41
Gli1P47806 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.47□□□□□ -0.41
Gli1P47806 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Gli1P47806 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.47□□□□□ -0.41
Gli1P47806 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Gm15198-201ENSMUST00000117283 177 ntBASIC12.47□□□□□ -0.41
Gli1P47806 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Gli1P47806 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.47□□□□□ -0.41
Gli1P47806 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Gm27572-201ENSMUST00000183702 255 ntBASIC12.47□□□□□ -0.41
Gli1P47806 Gm29649-201ENSMUST00000185649 419 ntBASIC12.47□□□□□ -0.41
Gli1P47806 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.47□□□□□ -0.41
Gli1P47806 Gm7561-201ENSMUST00000211203 886 ntBASIC12.47□□□□□ -0.41
Gli1P47806 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Gli1P47806 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.47□□□□□ -0.41
Gli1P47806 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Gli1P47806 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.47□□□□□ -0.41
Gli1P47806 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Gli1P47806 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gli1P47806 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Gli1P47806 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gli1P47806 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gli1P47806 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gli1P47806 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.46□□□□□ -0.41
Gli1P47806 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gli1P47806 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Gli1P47806 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gli1P47806 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.46□□□□□ -0.41
Gli1P47806 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gli1P47806 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
Gli1P47806 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.46□□□□□ -0.41
Gli1P47806 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.46□□□□□ -0.41
Gli1P47806 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.46□□□□□ -0.41
Gli1P47806 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gli1P47806 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.46□□□□□ -0.41
Gli1P47806 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gli1P47806 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.46□□□□□ -0.41
Gli1P47806 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gli1P47806 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gli1P47806 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Gli1P47806 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gli1P47806 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Gli1P47806 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.46□□□□□ -0.41
Gli1P47806 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gli1P47806 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gli1P47806 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gli1P47806 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Gli1P47806 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gli1P47806 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gli1P47806 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gli1P47806 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gli1P47806 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.45□□□□□ -0.42
Gli1P47806 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gli1P47806 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gli1P47806 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.45□□□□□ -0.42
Gli1P47806 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Gli1P47806 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gli1P47806 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gli1P47806 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gli1P47806 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gli1P47806 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gli1P47806 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.45□□□□□ -0.42
Gli1P47806 Gm11524-201ENSMUST00000119349 807 ntBASIC12.45□□□□□ -0.42
Gli1P47806 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms