Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Foxa1P35582 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Foxa1P35582 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Foxa1P35582 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Foxa1P35582 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Foxa1P35582 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Foxa1P35582 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.79□□□□□ -0.52
Foxa1P35582 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.79□□□□□ -0.52
Foxa1P35582 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.79□□□□□ -0.52
Foxa1P35582 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.79□□□□□ -0.52
Foxa1P35582 Gm27514-201ENSMUST00000183692 110 ntBASIC11.79□□□□□ -0.52
Foxa1P35582 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.79□□□□□ -0.52
Foxa1P35582 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.79□□□□□ -0.52
Foxa1P35582 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.79□□□□□ -0.52
Foxa1P35582 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.79□□□□□ -0.52
Foxa1P35582 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Foxa1P35582 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.79□□□□□ -0.52
Foxa1P35582 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.79□□□□□ -0.52
Foxa1P35582 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Foxa1P35582 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Foxa1P35582 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.78□□□□□ -0.52
Foxa1P35582 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Foxa1P35582 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.78□□□□□ -0.52
Foxa1P35582 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Gm23931-201ENSMUST00000103842 109 ntBASIC11.78□□□□□ -0.52
Foxa1P35582 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.78□□□□□ -0.52
Foxa1P35582 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.78□□□□□ -0.52
Foxa1P35582 Gm12502-201ENSMUST00000120197 444 ntBASIC11.78□□□□□ -0.52
Foxa1P35582 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.78□□□□□ -0.52
Foxa1P35582 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.78□□□□□ -0.52
Foxa1P35582 Gm7809-201ENSMUST00000153199 742 ntBASIC11.78□□□□□ -0.52
Foxa1P35582 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Foxa1P35582 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.78□□□□□ -0.52
Foxa1P35582 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Foxa1P35582 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.78□□□□□ -0.52
Foxa1P35582 AY702102-202ENSMUST00000194651 1173 ntBASIC11.78□□□□□ -0.52
Foxa1P35582 Gm37008-201ENSMUST00000195712 319 ntBASIC11.78□□□□□ -0.52
Foxa1P35582 Gm18584-201ENSMUST00000203098 964 ntBASIC11.78□□□□□ -0.52
Foxa1P35582 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Foxa1P35582 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Foxa1P35582 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Foxa1P35582 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Foxa1P35582 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Foxa1P35582 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms