Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxc9P09633 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxc9P09633 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxc9P09633 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxc9P09633 Gm5939-201ENSMUST00000119613 2874 ntBASIC16.42■□□□□ 0.22
Hoxc9P09633 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC16.42■□□□□ 0.22
Hoxc9P09633 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxc9P09633 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxc9P09633 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxc9P09633 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Hoxc9P09633 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxc9P09633 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxc9P09633 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Hoxc9P09633 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.42■□□□□ 0.22
Hoxc9P09633 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Hoxc9P09633 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Gm24934-201ENSMUST00000103764 111 ntBASIC16.41■□□□□ 0.22
Hoxc9P09633 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Hoxc9P09633 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Gm11989-201ENSMUST00000117240 672 ntBASIC16.41■□□□□ 0.22
Hoxc9P09633 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC16.41■□□□□ 0.22
Hoxc9P09633 Gm13611-201ENSMUST00000118269 318 ntBASIC16.41■□□□□ 0.22
Hoxc9P09633 Gm11362-201ENSMUST00000118838 850 ntBASIC16.41■□□□□ 0.22
Hoxc9P09633 Gm11450-201ENSMUST00000121144 333 ntBASIC16.41■□□□□ 0.22
Hoxc9P09633 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC16.41■□□□□ 0.22
Hoxc9P09633 Gm9211-201ENSMUST00000182882 975 ntBASIC16.41■□□□□ 0.22
Hoxc9P09633 Gm28071-201ENSMUST00000190355 478 ntBASIC16.41■□□□□ 0.22
Hoxc9P09633 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Hoxc9P09633 Gm18556-201ENSMUST00000219748 1031 ntBASIC16.41■□□□□ 0.22
Hoxc9P09633 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Hoxc9P09633 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC16.41■□□□□ 0.22
Hoxc9P09633 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc9P09633 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC16.41■□□□□ 0.22
Hoxc9P09633 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC16.4■□□□□ 0.22
Hoxc9P09633 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Hoxc9P09633 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Gm9062-201ENSMUST00000117712 727 ntBASIC16.4■□□□□ 0.22
Hoxc9P09633 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC16.4■□□□□ 0.22
Hoxc9P09633 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Hoxc9P09633 Gm7207-201ENSMUST00000211575 1067 ntBASIC16.4■□□□□ 0.22
Hoxc9P09633 Gm10371-202ENSMUST00000228010 1081 ntBASIC16.4■□□□□ 0.22
Hoxc9P09633 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Hoxc9P09633 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC16.4■□□□□ 0.22
Hoxc9P09633 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc9P09633 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC16.39■□□□□ 0.22
Hoxc9P09633 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Hoxc9P09633 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.39■□□□□ 0.21
Hoxc9P09633 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 AC123619.2-202ENSMUST00000225097 1568 ntBASIC16.39■□□□□ 0.21
Hoxc9P09633 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.39■□□□□ 0.21
Hoxc9P09633 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC16.39■□□□□ 0.21
Hoxc9P09633 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Hoxc9P09633 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms