Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gm45118-201ENSMUST00000208928 825 ntBASIC13.49□□□□□ -0.25
Hoxc8P09025 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.49□□□□□ -0.25
Hoxc8P09025 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Hoxc8P09025 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Hoxc8P09025 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Hoxc8P09025 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Hoxc8P09025 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.49□□□□□ -0.25
Hoxc8P09025 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.48□□□□□ -0.25
Hoxc8P09025 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Hoxc8P09025 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.48□□□□□ -0.25
Hoxc8P09025 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Hoxc8P09025 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Hoxc8P09025 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.48□□□□□ -0.25
Hoxc8P09025 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.48□□□□□ -0.25
Hoxc8P09025 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.48□□□□□ -0.25
Hoxc8P09025 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Hoxc8P09025 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Gm13035-201ENSMUST00000117496 342 ntBASIC13.48□□□□□ -0.25
Hoxc8P09025 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.48□□□□□ -0.25
Hoxc8P09025 Gm9550-201ENSMUST00000161130 862 ntBASIC13.48□□□□□ -0.25
Hoxc8P09025 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.48□□□□□ -0.25
Hoxc8P09025 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Gm37835-201ENSMUST00000193305 361 ntBASIC13.48□□□□□ -0.25
Hoxc8P09025 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Hoxc8P09025 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.48□□□□□ -0.25
Hoxc8P09025 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Gm5455-201ENSMUST00000058710 715 ntBASIC13.48□□□□□ -0.25
Hoxc8P09025 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Hoxc8P09025 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Hoxc8P09025 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Hoxc8P09025 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.48□□□□□ -0.25
Hoxc8P09025 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Hoxc8P09025 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hoxc8P09025 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.47□□□□□ -0.25
Hoxc8P09025 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.47□□□□□ -0.25
Hoxc8P09025 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Hoxc8P09025 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Gm12616-201ENSMUST00000118594 382 ntBASIC13.47□□□□□ -0.25
Hoxc8P09025 Gm11941-201ENSMUST00000119904 610 ntBASIC13.47□□□□□ -0.25
Hoxc8P09025 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Hoxc8P09025 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.47□□□□□ -0.25
Hoxc8P09025 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Hoxc8P09025 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Hoxc8P09025 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.47□□□□□ -0.25
Hoxc8P09025 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
Hoxc8P09025 Gm12624-201ENSMUST00000177615 382 ntBASIC13.47□□□□□ -0.25
Hoxc8P09025 Gm12621-201ENSMUST00000177760 382 ntBASIC13.47□□□□□ -0.25
Hoxc8P09025 Gm12615-201ENSMUST00000177970 382 ntBASIC13.47□□□□□ -0.25
Hoxc8P09025 Gm12622-201ENSMUST00000177975 382 ntBASIC13.47□□□□□ -0.25
Hoxc8P09025 Gm12627-201ENSMUST00000178412 382 ntBASIC13.47□□□□□ -0.25
Hoxc8P09025 Gm12625-201ENSMUST00000179122 382 ntBASIC13.47□□□□□ -0.25
Hoxc8P09025 Gm12614-201ENSMUST00000179586 382 ntBASIC13.47□□□□□ -0.25
Hoxc8P09025 Gm12613-201ENSMUST00000180323 382 ntBASIC13.47□□□□□ -0.25
Hoxc8P09025 Gm19353-201ENSMUST00000184561 445 ntBASIC13.47□□□□□ -0.25
Hoxc8P09025 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.47□□□□□ -0.25
Hoxc8P09025 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.47□□□□□ -0.25
Hoxc8P09025 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.47□□□□□ -0.25
Hoxc8P09025 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms