Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PdgfrbP05622 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.92□□□□□ -0.34
PdgfrbP05622 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdgfrbP05622 Gm27682-201ENSMUST00000183930 110 ntBASIC12.92□□□□□ -0.34
PdgfrbP05622 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PdgfrbP05622 Gm40466-201ENSMUST00000212174 422 ntBASIC12.92□□□□□ -0.34
PdgfrbP05622 AC159246.1-201ENSMUST00000214478 249 ntBASIC12.92□□□□□ -0.34
PdgfrbP05622 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.92□□□□□ -0.34
PdgfrbP05622 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdgfrbP05622 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdgfrbP05622 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdgfrbP05622 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
PdgfrbP05622 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdgfrbP05622 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
PdgfrbP05622 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdgfrbP05622 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
PdgfrbP05622 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdgfrbP05622 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdgfrbP05622 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PdgfrbP05622 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.91□□□□□ -0.34
PdgfrbP05622 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
PdgfrbP05622 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.91□□□□□ -0.34
PdgfrbP05622 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.91□□□□□ -0.34
PdgfrbP05622 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.91□□□□□ -0.34
PdgfrbP05622 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
PdgfrbP05622 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
PdgfrbP05622 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Gm1335-201ENSMUST00000121653 386 ntBASIC12.91□□□□□ -0.34
PdgfrbP05622 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.91□□□□□ -0.34
PdgfrbP05622 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.91□□□□□ -0.34
PdgfrbP05622 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.91□□□□□ -0.34
PdgfrbP05622 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
PdgfrbP05622 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Gm43818-201ENSMUST00000200605 466 ntBASIC12.91□□□□□ -0.34
PdgfrbP05622 Gm4768-201ENSMUST00000206199 686 ntBASIC12.91□□□□□ -0.34
PdgfrbP05622 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
PdgfrbP05622 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
PdgfrbP05622 Gm32025-201ENSMUST00000217960 307 ntBASIC12.91□□□□□ -0.34
PdgfrbP05622 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.91□□□□□ -0.34
PdgfrbP05622 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Gm10268-201ENSMUST00000085340 555 ntBASIC12.91□□□□□ -0.34
PdgfrbP05622 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
PdgfrbP05622 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
PdgfrbP05622 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
PdgfrbP05622 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
PdgfrbP05622 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PdgfrbP05622 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PdgfrbP05622 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.9□□□□□ -0.34
PdgfrbP05622 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.9□□□□□ -0.34
PdgfrbP05622 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.9□□□□□ -0.34
PdgfrbP05622 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PdgfrbP05622 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PdgfrbP05622 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PdgfrbP05622 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PdgfrbP05622 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PdgfrbP05622 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.9□□□□□ -0.34
PdgfrbP05622 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PdgfrbP05622 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.9□□□□□ -0.34
PdgfrbP05622 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PdgfrbP05622 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
PdgfrbP05622 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.9□□□□□ -0.34
PdgfrbP05622 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
PdgfrbP05622 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PdgfrbP05622 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.9□□□□□ -0.34
PdgfrbP05622 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.9□□□□□ -0.34
PdgfrbP05622 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.9□□□□□ -0.34
PdgfrbP05622 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PdgfrbP05622 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
PdgfrbP05622 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
PdgfrbP05622 Gm23363-201ENSMUST00000175024 79 ntBASIC12.9□□□□□ -0.34
PdgfrbP05622 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PdgfrbP05622 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.9□□□□□ -0.34
PdgfrbP05622 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.9□□□□□ -0.34
PdgfrbP05622 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC12.9□□□□□ -0.34
PdgfrbP05622 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PdgfrbP05622 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
PdgfrbP05622 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PdgfrbP05622 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms