Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 Gm15131-201ENSMUST00000119124 595 ntBASIC16.23■□□□□ 0.19
Ubr1O70481 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC16.23■□□□□ 0.19
Ubr1O70481 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Ubr1O70481 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC16.23■□□□□ 0.19
Ubr1O70481 Gm4157-201ENSMUST00000211647 679 ntBASIC16.23■□□□□ 0.19
Ubr1O70481 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC16.23■□□□□ 0.19
Ubr1O70481 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ubr1O70481 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ubr1O70481 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ubr1O70481 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC16.23■□□□□ 0.19
Ubr1O70481 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ubr1O70481 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC16.22■□□□□ 0.19
Ubr1O70481 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC16.22■□□□□ 0.19
Ubr1O70481 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Ubr1O70481 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ubr1O70481 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.22■□□□□ 0.19
Ubr1O70481 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ubr1O70481 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ubr1O70481 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC16.22■□□□□ 0.19
Ubr1O70481 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ubr1O70481 Gm12857-201ENSMUST00000117678 592 ntBASIC16.22■□□□□ 0.19
Ubr1O70481 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC16.22■□□□□ 0.19
Ubr1O70481 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC16.22■□□□□ 0.19
Ubr1O70481 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Gm9797-202ENSMUST00000218003 294 ntBASIC16.22■□□□□ 0.19
Ubr1O70481 AC151275.1-201ENSMUST00000224870 585 ntBASIC16.22■□□□□ 0.19
Ubr1O70481 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC16.22■□□□□ 0.19
Ubr1O70481 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr1O70481 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr1O70481 Gm8038-201ENSMUST00000164674 2044 ntBASIC16.21■□□□□ 0.19
Ubr1O70481 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr1O70481 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Ubr1O70481 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr1O70481 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC16.21■□□□□ 0.19
Ubr1O70481 Gm9540-201ENSMUST00000188230 478 ntBASIC16.21■□□□□ 0.19
Ubr1O70481 Gm42629-201ENSMUST00000199063 1102 ntBASIC16.21■□□□□ 0.19
Ubr1O70481 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr1O70481 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr1O70481 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC16.21■□□□□ 0.19
Ubr1O70481 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr1O70481 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC16.21■□□□□ 0.19
Ubr1O70481 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC16.21■□□□□ 0.19
Ubr1O70481 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr1O70481 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC16.21■□□□□ 0.19
Ubr1O70481 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ubr1O70481 AC241621.2-201ENSMUST00000223991 2151 ntBASIC16.21■□□□□ 0.19
Ubr1O70481 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ubr1O70481 Gm5847-201ENSMUST00000178959 1595 ntBASIC16.21■□□□□ 0.18
Ubr1O70481 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ubr1O70481 Gm14724-201ENSMUST00000118400 537 ntBASIC16.21■□□□□ 0.18
Ubr1O70481 Rprl1-201ENSMUST00000158050 327 ntBASIC16.21■□□□□ 0.18
Ubr1O70481 Gm6397-201ENSMUST00000161973 1069 ntBASIC16.21■□□□□ 0.18
Ubr1O70481 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC16.21■□□□□ 0.18
Ubr1O70481 Gm5733-201ENSMUST00000190232 939 ntBASIC16.21■□□□□ 0.18
Ubr1O70481 Gm9826-201ENSMUST00000029124 1299 ntBASIC16.21■□□□□ 0.18
Ubr1O70481 Gm5705-201ENSMUST00000066241 711 ntBASIC16.21■□□□□ 0.18
Ubr1O70481 Gm10288-201ENSMUST00000084614 537 ntBASIC16.21■□□□□ 0.18
Ubr1O70481 Gm7551-201ENSMUST00000089593 1074 ntBASIC16.21■□□□□ 0.18
Ubr1O70481 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr1O70481 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Ubr1O70481 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr1O70481 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Ubr1O70481 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr1O70481 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr1O70481 Gm38346-201ENSMUST00000192379 2639 ntBASIC16.2■□□□□ 0.18
Ubr1O70481 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr1O70481 Gm4735-201ENSMUST00000138679 1302 ntBASIC16.2■□□□□ 0.18
Ubr1O70481 Gm5855-201ENSMUST00000200240 1305 ntBASIC16.2■□□□□ 0.18
Ubr1O70481 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr1O70481 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ubr1O70481 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms