Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac1O09106 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac1O09106 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac1O09106 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac1O09106 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Hdac1O09106 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Hdac1O09106 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac1O09106 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC15.14■□□□□ 0.01
Hdac1O09106 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.14■□□□□ 0.01
Hdac1O09106 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac1O09106 Proscos-202ENSMUST00000178990 666 ntBASIC15.14■□□□□ 0.01
Hdac1O09106 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Hdac1O09106 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.14■□□□□ 0.01
Hdac1O09106 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Hdac1O09106 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.14■□□□□ 0.01
Hdac1O09106 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.14■□□□□ 0.01
Hdac1O09106 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac1O09106 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac1O09106 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.14■□□□□ 0.01
Hdac1O09106 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Hdac1O09106 Arhgef3-204ENSMUST00000225949 3198 ntBASIC15.14■□□□□ 0.01
Hdac1O09106 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac1O09106 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac1O09106 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac1O09106 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.14■□□□□ 0.01
Hdac1O09106 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac1O09106 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Hdac1O09106 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Hdac1O09106 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hdac1O09106 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC15.13■□□□□ 0.01
Hdac1O09106 AC126262.1-201ENSMUST00000221802 1904 ntBASIC15.13■□□□□ 0.01
Hdac1O09106 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.13■□□□□ 0.01
Hdac1O09106 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.13■□□□□ 0.01
Hdac1O09106 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.13■□□□□ 0.01
Hdac1O09106 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.13■□□□□ 0.01
Hdac1O09106 Gm8099-201ENSMUST00000200510 742 ntBASIC15.13■□□□□ 0.01
Hdac1O09106 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.13■□□□□ 0.01
Hdac1O09106 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Hdac1O09106 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Hdac1O09106 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Hdac1O09106 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Hdac1O09106 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hdac1O09106 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
Hdac1O09106 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 AC122860.2-201ENSMUST00000217967 2671 ntBASIC15.12■□□□□ 0.01
Hdac1O09106 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Hdac1O09106 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 Gm13612-201ENSMUST00000119276 390 ntBASIC15.12■□□□□ 0.01
Hdac1O09106 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 Gm23363-201ENSMUST00000175024 79 ntBASIC15.12■□□□□ 0.01
Hdac1O09106 Gm42599-201ENSMUST00000201308 469 ntBASIC15.12■□□□□ 0.01
Hdac1O09106 AC098716.1-201ENSMUST00000213527 703 ntBASIC15.12■□□□□ 0.01
Hdac1O09106 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Hdac1O09106 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC15.12■□□□□ 0.01
Hdac1O09106 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hdac1O09106 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hdac1O09106 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hdac1O09106 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hdac1O09106 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hdac1O09106 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Hdac1O09106 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hdac1O09106 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.11■□□□□ 0.01
Hdac1O09106 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hdac1O09106 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms