Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shisa8J3QNX5 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shisa8J3QNX5 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shisa8J3QNX5 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shisa8J3QNX5 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.63□□□□□ -0.55
Shisa8J3QNX5 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.63□□□□□ -0.55
Shisa8J3QNX5 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Shisa8J3QNX5 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shisa8J3QNX5 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.63□□□□□ -0.55
Shisa8J3QNX5 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Shisa8J3QNX5 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Shisa8J3QNX5 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Shisa8J3QNX5 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shisa8J3QNX5 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shisa8J3QNX5 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Shisa8J3QNX5 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shisa8J3QNX5 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shisa8J3QNX5 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Shisa8J3QNX5 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Shisa8J3QNX5 Map1b-203ENSMUST00000223725 2669 ntBASIC11.63□□□□□ -0.55
Shisa8J3QNX5 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shisa8J3QNX5 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Mir686-201ENSMUST00000102174 109 ntBASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Gm13689-201ENSMUST00000119360 685 ntBASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.61□□□□□ -0.55
Shisa8J3QNX5 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Gm26308-201ENSMUST00000157768 69 ntBASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Gm29667-201ENSMUST00000190817 490 ntBASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Gm2756-201ENSMUST00000195851 400 ntBASIC11.61□□□□□ -0.55
Shisa8J3QNX5 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Gm9797-201ENSMUST00000052902 613 ntBASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shisa8J3QNX5 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms