Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.98□□□□□ -0.01
Pcdhb9E9Q5G2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb9E9Q5G2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb9E9Q5G2 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb9E9Q5G2 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pcdhb9E9Q5G2 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb9E9Q5G2 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb9E9Q5G2 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb9E9Q5G2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb9E9Q5G2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Gm7584-201ENSMUST00000175829 940 ntBASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Gm44364-201ENSMUST00000198368 141 ntBASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb9E9Q5G2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Gm37259-201ENSMUST00000193903 849 ntBASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Gm30285-201ENSMUST00000214614 422 ntBASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb9E9Q5G2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb9E9Q5G2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb9E9Q5G2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Pcdhb9E9Q5G2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb9E9Q5G2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb9E9Q5G2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb9E9Q5G2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdhb9E9Q5G2 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Gm24231-201ENSMUST00000104315 133 ntBASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Gm13350-201ENSMUST00000120519 479 ntBASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms