Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Gm24526-201ENSMUST00000082921 158 ntBASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cpsf4lE9Q2N0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Gm22018-201ENSMUST00000104357 131 ntBASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Gm5187-201ENSMUST00000117317 991 ntBASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Gm16379-201ENSMUST00000161469 348 ntBASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Gm37424-201ENSMUST00000191727 561 ntBASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Gm8762-201ENSMUST00000193486 339 ntBASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 AY702102-202ENSMUST00000194651 1173 ntBASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Gm37008-201ENSMUST00000195712 319 ntBASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cpsf4lE9Q2N0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Gm8738-201ENSMUST00000172606 329 ntBASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms