Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb2S4R1M3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.77□□□□□ -0.36
H2afb2S4R1M3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afb2S4R1M3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afb2S4R1M3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
H2afb2S4R1M3 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.77□□□□□ -0.36
H2afb2S4R1M3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
H2afb2S4R1M3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afb2S4R1M3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
H2afb2S4R1M3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
H2afb2S4R1M3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.77□□□□□ -0.36
H2afb2S4R1M3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Gm11424-201ENSMUST00000121929 829 ntBASIC12.77□□□□□ -0.37
H2afb2S4R1M3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H2afb2S4R1M3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Snord83b-201ENSMUST00000104546 94 ntBASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb2S4R1M3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Gm12363-201ENSMUST00000122250 668 ntBASIC12.75□□□□□ -0.37
H2afb2S4R1M3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms