Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm28292-201ENSMUST00000186593 697 ntBASIC14.89□□□□□ -0.03
Scn11aQ9R053 Gm28101-201ENSMUST00000187608 697 ntBASIC14.89□□□□□ -0.03
Scn11aQ9R053 Gm29076-201ENSMUST00000187689 697 ntBASIC14.89□□□□□ -0.03
Scn11aQ9R053 Gm28302-201ENSMUST00000187931 697 ntBASIC14.89□□□□□ -0.03
Scn11aQ9R053 Gm28646-201ENSMUST00000188220 697 ntBASIC14.89□□□□□ -0.03
Scn11aQ9R053 Gm28205-201ENSMUST00000189177 697 ntBASIC14.89□□□□□ -0.03
Scn11aQ9R053 Gm29032-201ENSMUST00000189797 697 ntBASIC14.89□□□□□ -0.03
Scn11aQ9R053 Gm28695-201ENSMUST00000190300 697 ntBASIC14.89□□□□□ -0.03
Scn11aQ9R053 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Scn11aQ9R053 Gm37448-201ENSMUST00000192795 697 ntBASIC14.89□□□□□ -0.03
Scn11aQ9R053 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn11aQ9R053 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.89□□□□□ -0.03
Scn11aQ9R053 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.89□□□□□ -0.03
Scn11aQ9R053 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.89□□□□□ -0.03
Scn11aQ9R053 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn11aQ9R053 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn11aQ9R053 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn11aQ9R053 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn11aQ9R053 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn11aQ9R053 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.89□□□□□ -0.03
Scn11aQ9R053 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn11aQ9R053 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Scn11aQ9R053 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Scn11aQ9R053 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Gm15515-201ENSMUST00000117827 822 ntBASIC14.88□□□□□ -0.03
Scn11aQ9R053 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.88□□□□□ -0.03
Scn11aQ9R053 Gm12196-201ENSMUST00000120954 262 ntBASIC14.88□□□□□ -0.03
Scn11aQ9R053 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Scn11aQ9R053 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.88□□□□□ -0.03
Scn11aQ9R053 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.88□□□□□ -0.03
Scn11aQ9R053 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.88□□□□□ -0.03
Scn11aQ9R053 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.88□□□□□ -0.03
Scn11aQ9R053 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Gm17931-201ENSMUST00000208132 634 ntBASIC14.88□□□□□ -0.03
Scn11aQ9R053 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.88□□□□□ -0.03
Scn11aQ9R053 AC174797.2-202ENSMUST00000225729 568 ntBASIC14.88□□□□□ -0.03
Scn11aQ9R053 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Scn11aQ9R053 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn11aQ9R053 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn11aQ9R053 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.87□□□□□ -0.03
Scn11aQ9R053 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.87□□□□□ -0.03
Scn11aQ9R053 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
Scn11aQ9R053 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.87□□□□□ -0.03
Scn11aQ9R053 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.87□□□□□ -0.03
Scn11aQ9R053 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.87□□□□□ -0.03
Scn11aQ9R053 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.87□□□□□ -0.03
Scn11aQ9R053 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.87□□□□□ -0.03
Scn11aQ9R053 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Scn11aQ9R053 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms