Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.6□□□□□ -0.39
OtofQ9ESF1 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Gm18212-201ENSMUST00000211678 889 ntBASIC12.6□□□□□ -0.39
OtofQ9ESF1 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.6□□□□□ -0.39
OtofQ9ESF1 Gm10076-201ENSMUST00000073238 384 ntBASIC12.6□□□□□ -0.39
OtofQ9ESF1 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.6□□□□□ -0.39
OtofQ9ESF1 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Gm13296-201ENSMUST00000117854 997 ntBASIC12.6□□□□□ -0.39
OtofQ9ESF1 Gm4909-201ENSMUST00000118749 794 ntBASIC12.6□□□□□ -0.39
OtofQ9ESF1 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
OtofQ9ESF1 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.6□□□□□ -0.39
OtofQ9ESF1 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.6□□□□□ -0.39
OtofQ9ESF1 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
OtofQ9ESF1 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.59□□□□□ -0.39
OtofQ9ESF1 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Gm23119-201ENSMUST00000158610 140 ntBASIC12.59□□□□□ -0.39
OtofQ9ESF1 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.59□□□□□ -0.39
OtofQ9ESF1 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
OtofQ9ESF1 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.58□□□□□ -0.39
OtofQ9ESF1 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
OtofQ9ESF1 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Gm24231-201ENSMUST00000104315 133 ntBASIC12.58□□□□□ -0.4
OtofQ9ESF1 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.58□□□□□ -0.4
OtofQ9ESF1 B9d1os-201ENSMUST00000137010 674 ntBASIC12.58□□□□□ -0.4
OtofQ9ESF1 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Gm44651-201ENSMUST00000207343 372 ntBASIC12.58□□□□□ -0.4
OtofQ9ESF1 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Gm10312-201ENSMUST00000078515 489 ntBASIC12.58□□□□□ -0.4
OtofQ9ESF1 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
OtofQ9ESF1 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms