Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Gm13736-201ENSMUST00000119272 253 ntBASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Gm38341-201ENSMUST00000195357 515 ntBASIC11.74□□□□□ -0.53
Rita1Q9D1H0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Gm11531-201ENSMUST00000117614 555 ntBASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Gm13350-201ENSMUST00000120519 479 ntBASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Gm2546-201ENSMUST00000182630 991 ntBASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Gm44405-201ENSMUST00000198952 126 ntBASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Gm7783-201ENSMUST00000204795 781 ntBASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rita1Q9D1H0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rita1Q9D1H0 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.72□□□□□ -0.53
Rita1Q9D1H0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rita1Q9D1H0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rita1Q9D1H0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rita1Q9D1H0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rita1Q9D1H0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rita1Q9D1H0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.72□□□□□ -0.53
Rita1Q9D1H0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rita1Q9D1H0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rita1Q9D1H0 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.72□□□□□ -0.53
Rita1Q9D1H0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rita1Q9D1H0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rita1Q9D1H0 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.72□□□□□ -0.53
Rita1Q9D1H0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rita1Q9D1H0 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rita1Q9D1H0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.72□□□□□ -0.53
Rita1Q9D1H0 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms