Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Gm15703-201ENSMUST00000120250 880 ntBASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Gm9507-202ENSMUST00000180157 654 ntBASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Gm35713-201ENSMUST00000210516 199 ntBASIC12.64□□□□□ -0.39
Cdh23Q99PF4 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Gm43184-201ENSMUST00000197247 542 ntBASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdh23Q99PF4 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Gm25063-201ENSMUST00000104666 94 ntBASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Gm43186-201ENSMUST00000198130 824 ntBASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Gm18968-201ENSMUST00000221319 862 ntBASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.63□□□□□ -0.39
Cdh23Q99PF4 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Gm7719-201ENSMUST00000182374 975 ntBASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh23Q99PF4 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Cdh23Q99PF4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms