Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Gm12943-201ENSMUST00000119616 210 ntBASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Gm13875-201ENSMUST00000120162 282 ntBASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Gm45398-201ENSMUST00000210561 165 ntBASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col25a1Q99MQ5 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Gm23251-201ENSMUST00000103773 110 ntBASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Gm14058-201ENSMUST00000116082 735 ntBASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Gm12403-201ENSMUST00000121384 959 ntBASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Gm22138-201ENSMUST00000158748 128 ntBASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Gzmn-202ENSMUST00000225535 989 ntBASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col25a1Q99MQ5 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col25a1Q99MQ5 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms