Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm7848-201ENSMUST00000210739 718 ntBASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12□□□□□ -0.49
Nkx6-1Q99MA9 AC166344.1-202ENSMUST00000224139 234 ntBASIC12□□□□□ -0.49
Nkx6-1Q99MA9 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Dhrs4-202ENSMUST00000226168 828 ntBASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Gm19863-201ENSMUST00000192480 2218 ntBASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Gm6992-201ENSMUST00000217973 1607 ntBASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx6-1Q99MA9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Gm13736-201ENSMUST00000119272 253 ntBASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Gm9555-201ENSMUST00000200908 583 ntBASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx6-1Q99MA9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Gm13408-201ENSMUST00000119822 798 ntBASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Gm11597-201ENSMUST00000121423 964 ntBASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Gm13935-201ENSMUST00000121859 798 ntBASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Gm12208-201ENSMUST00000122004 163 ntBASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Gm18734-201ENSMUST00000172937 808 ntBASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms