Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc1bQ920F6 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Gm4909-201ENSMUST00000118749 794 ntBASIC14.78□□□□□ -0.04
Smc1bQ920F6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Smc1bQ920F6 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Gm42997-202ENSMUST00000200321 985 ntBASIC14.78□□□□□ -0.04
Smc1bQ920F6 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.78□□□□□ -0.04
Smc1bQ920F6 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.78□□□□□ -0.04
Smc1bQ920F6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc1bQ920F6 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc1bQ920F6 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.78□□□□□ -0.04
Smc1bQ920F6 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smc1bQ920F6 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smc1bQ920F6 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smc1bQ920F6 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smc1bQ920F6 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smc1bQ920F6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smc1bQ920F6 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.77□□□□□ -0.04
Smc1bQ920F6 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Smc1bQ920F6 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.04
Smc1bQ920F6 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Smc1bQ920F6 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc1bQ920F6 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Smc1bQ920F6 Gm8805-201ENSMUST00000117848 313 ntBASIC14.77□□□□□ -0.05
Smc1bQ920F6 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.77□□□□□ -0.05
Smc1bQ920F6 Gm24514-201ENSMUST00000174961 285 ntBASIC14.77□□□□□ -0.05
Smc1bQ920F6 Gm2260-201ENSMUST00000184965 657 ntBASIC14.77□□□□□ -0.05
Smc1bQ920F6 Gm18212-201ENSMUST00000211678 889 ntBASIC14.77□□□□□ -0.05
Smc1bQ920F6 Gm19208-201ENSMUST00000213861 912 ntBASIC14.77□□□□□ -0.05
Smc1bQ920F6 Gm5781-201ENSMUST00000219792 443 ntBASIC14.77□□□□□ -0.05
Smc1bQ920F6 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc1bQ920F6 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc1bQ920F6 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc1bQ920F6 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc1bQ920F6 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.77□□□□□ -0.05
Smc1bQ920F6 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smc1bQ920F6 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc1bQ920F6 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc1bQ920F6 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc1bQ920F6 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc1bQ920F6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Smc1bQ920F6 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.77□□□□□ -0.05
Smc1bQ920F6 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Smc1bQ920F6 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smc1bQ920F6 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Smc1bQ920F6 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Smc1bQ920F6 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Gm14726-201ENSMUST00000120623 896 ntBASIC14.76□□□□□ -0.05
Smc1bQ920F6 Gm24548-201ENSMUST00000158650 108 ntBASIC14.76□□□□□ -0.05
Smc1bQ920F6 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Smc1bQ920F6 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smc1bQ920F6 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smc1bQ920F6 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.75□□□□□ -0.05
Smc1bQ920F6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smc1bQ920F6 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms