Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Gm9002-201ENSMUST00000178437 499 ntBASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Gm17794-201ENSMUST00000220252 955 ntBASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.42□□□□□ -0.58
Pcdhga3Q91XY5 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Gm12490-201ENSMUST00000120255 560 ntBASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Gm44069-201ENSMUST00000204898 506 ntBASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Gm5356-201ENSMUST00000093326 615 ntBASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pcdhga3Q91XY5 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdhga3Q91XY5 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms