Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Gm4984-201ENSMUST00000115987 360 ntBASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Gm16479-201ENSMUST00000121706 932 ntBASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.14□□□□□ -0.47
Ubqln1Q8R317 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ubqln1Q8R317 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.13□□□□□ -0.47
Ubqln1Q8R317 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ubqln1Q8R317 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Gm14921-201ENSMUST00000118643 908 ntBASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Gm37042-201ENSMUST00000193816 581 ntBASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ubqln1Q8R317 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms