Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ppp4r4Q8C0Y0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ppp4r4Q8C0Y0 Gm13123-201ENSMUST00000122173 492 ntBASIC12.96□□□□□ -0.33
Ppp4r4Q8C0Y0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ppp4r4Q8C0Y0 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ppp4r4Q8C0Y0 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ppp4r4Q8C0Y0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ppp4r4Q8C0Y0 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ppp4r4Q8C0Y0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ppp4r4Q8C0Y0 Gm25857-201ENSMUST00000082788 129 ntBASIC12.96□□□□□ -0.33
Ppp4r4Q8C0Y0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ppp4r4Q8C0Y0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.96□□□□□ -0.33
Ppp4r4Q8C0Y0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ppp4r4Q8C0Y0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ppp4r4Q8C0Y0 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ppp4r4Q8C0Y0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ppp4r4Q8C0Y0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ppp4r4Q8C0Y0 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ppp4r4Q8C0Y0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Gm19931-201ENSMUST00000198920 368 ntBASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ppp4r4Q8C0Y0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ppp4r4Q8C0Y0 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ppp4r4Q8C0Y0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ppp4r4Q8C0Y0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.93□□□□□ -0.34
Ppp4r4Q8C0Y0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
Ppp4r4Q8C0Y0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ppp4r4Q8C0Y0 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ppp4r4Q8C0Y0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ppp4r4Q8C0Y0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ppp4r4Q8C0Y0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ppp4r4Q8C0Y0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.93□□□□□ -0.34
Ppp4r4Q8C0Y0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ppp4r4Q8C0Y0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ppp4r4Q8C0Y0 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ppp4r4Q8C0Y0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms