Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim47Q8C0E3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Gm13342-201ENSMUST00000121055 207 ntBASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Gm20614-201ENSMUST00000177106 632 ntBASIC14.17□□□□□ -0.14
Trim47Q8C0E3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Gm38266-201ENSMUST00000194931 421 ntBASIC14.17□□□□□ -0.14
Trim47Q8C0E3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Cts7-204ENSMUST00000225321 1257 ntBASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Morn2-202ENSMUST00000227729 656 ntBASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim47Q8C0E3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Gm2991-201ENSMUST00000173338 480 ntBASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Gm43822-201ENSMUST00000200285 476 ntBASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Gm5904-201ENSMUST00000210286 865 ntBASIC14.16□□□□□ -0.14
Trim47Q8C0E3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim47Q8C0E3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Gm13492-201ENSMUST00000119772 665 ntBASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Gm43758-201ENSMUST00000199500 367 ntBASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.15□□□□□ -0.14
Trim47Q8C0E3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim47Q8C0E3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms